Forum

Nome Utente:
Password:
Riconoscimi automaticamente
 Tutti i Forum
 Laboratorio
 Bioinformatica e Biostatistica
 transeq
 Nuova Discussione  Nuovo Sondaggio Nuovo Sondaggio
 Rispondi Aggiungi ai Preferiti Aggiungi ai Preferiti
Cerca nelle discussioni
I seguenti utenti stanno leggendo questo Forum Qui c'č:

Aggiungi Tag Aggiungi i tag

Quanto č utile/interessante questa discussione:

Autore Discussione  

Gapemotivo
Nuovo Arrivato

Cittā: Napoli


3 Messaggi

Inserito il - 26 gennaio 2012 : 08:54:55  Mostra Profilo  Visita l'Homepage di Gapemotivo Invia a Gapemotivo un Messaggio Privato  Rispondi Quotando
Ho ottenuto con transeq questi frame di lettura,

>,_1 1440 bp.
RNIDHRSIDHHRLATSID*HMTAVVGTAEAEPAAKKAAPAKKAAPAAKKAAAPAAAKKAE
QKNAGPAETKPKAPEAPRGETDDDEDIELDGDVELEDLEDIDVDEIVAEDDADSEGDSDD
DDSDEEPKAADVAAVQKTEEEVLILSDDDDDAPVAQVAAAGATADPVKDYLKQIGKVPLL
NAEQEVELAKRIEAGLFAEEQLGGGETDGLPVDVKAELEWIAEDGRRAKNHLLEANLRLV
VSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQA
RTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELARELDMTPEKVVEVQKYGREPISL
HTPLGEEGDSEFGDLIEDSEAIVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTD
GQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD*IDR*YYIEKKKKKK
>,_2 1440 bp.
ETSIIDRSIIID*LHRSTST*PRSWAPLKPSRPPRRRPLPRRPPRRRRRPRHPPPPRRPS
RRTLGLPRPSRRRPRPRGARRTTTRTSSSTATWSWRTSRTSTSTRSSRKTTPTPRATPTT
TTPTRSPRPPTSPPCRRPRKRSSSSPTTTMTLRWPRWPPPAPPPTR*RTTSSRSARSPCS
TPSRRSSWPSASRRACSPRSSWAAARPTGCRSTSRPSWSGSPRTAAAPRTTCWRPTSGSW
SRWPSATPAAACSSST*SRKATSA*SGPWRSSTTPRATSSPPTPRGGSGRRSRVPWPTRR
GPSASRSTWSK*STSWPESSGRCCRTSAASPRRKSWPASWT*RPRRSSRSRSTAASPSPC
TPRWVRRATASSVTSSRTPRPSCRPTPSASRCCRSSCTPFSTRCRNARRASCRCGSASPT
VSRRRWTRSARFTGSPVSASARSSRRPCPSCATRPGPRSCATTWTESIDDTTSKKKKKKX
>,_3 1440 bp.
KHRSSIDRSSSTSYIDRLAHDRGRGHR*SRAGRQEGGPCQEGRPGGEEGRGTRRRQEGRA
EERWACRDQAEGARGPAGRDGRRRGHRARRRRGAGGPRGHRRRRDRRGRRRRLRGRLRRR
RLRRGAQGRRRRRRAEDRGRGPHPLRRRR*RSGGPGGRRRRHRRPGEGLPQADRQGPPAQ
RRAGGRAGQAHRGGPVRRGAAGRRRDRRAAGRRQGRAGVDRRGRPPRQEPPAGGQPPARG
LAGQALHRPRHALPRPDPGRQPRPDQGRGEVRLHQGLQVLHLRHVVDPAGDHACHGRPGA
DHPHPGPHGRSDQQAGPSPAADAAGPRPRAHAGRAGPRAGHDAREGRRGPEVRPRAHLPA
HPAG*GGRQRVR*PHRGLRGHRAGRRRQLHAAAGAAALRSRHAVGTRGGRRVDAVRPHRR
SAEDAGRDRQGLRGHP*AHPPDRVEDHVQAAPPVPVPGPARLPGLNRSMILHRKKKKKKX
>,_4 1440 bp.
FFFFFFFDVVSSIDSVQVVAQDLGPGRVAQLGHGLRLDLADALTGDPVNLADLVQRLRLT
VGEAEPHRHDARLAFRQRVENGVQLLLQQREADGVGRHDGLGVLDEVTELAVALLTQRGV
QGDGLAAVLLDLDDLLGRHVQLAGQLFRRGLAAEVLQHLPLDSGQLVDHFDHVDRDADGP
RLVGHGTRDRLPDPPRGVGGELVALGVVELLHGPDQAEVAFLDQVEEEHAAAGVALGQRD
HEPEVGLQQVVLGAAAVLGDPLQLGLDVDRQPVGLAAAQLLLGEQARLDALGQLDLLLGV
EQGDLADLLEVVLHRVGGGAGGGHLGHRSVIVVVGEDEDLFLGLLHGGDVGGLGLLVGVV
VVGVALGVGVVFRDDLVDVDVLEVLQLHVAVELDVLVVVRLAPRGLGRLRLGLGRPSVLL
LGLLGGGGCRGLLRRRGGLLGRGRLLGGRLGFSGAHDRGHVLVDRCS*SMMIDRSMIDVS
>,_5 1440 bp.
FFFFFFRCSIIDRFSPGSRAGPGTGTGGAAWTWSSTRSGGCAHG*PRKPCRSRPASSADR
R*GRTASTRRPPRVPTACRERSAAAPAAA*S*RRRPARWPRSPR*GHRTRCRPPHPAGCA
GRWARGRTSGPRRPSRASCPARGPALPAWARGRGPAASAAGLGPAC*SLRPCGPGCGWSA
PGRPWHA*SPAGSTTWRRWRTCSPWCSRTSPRP*SGRGCLPGSGRGRACRGRCSAWPARP
RAGGWPPAGGSWRGGRPRRSTPARP*RRPAARRSRRRPAAPRRTGPPRCAWPARPPARR*
AGGPCRSA*GSPSPGRRWRRRRPPGPPERHRRRRRG*GPLPRSSARRRRRRPWAPRRSRR
RRSRPRSRRRLPRRSRRRRCPRGPPAPRRRRARCPRRRPSRPAGPRAPSAWSRQAQRSSA
RPSWRRRVPRPSSPPGRPSWQGPPSWRPARLQRCPRPRSCASRSM*LVDDDRSIDDRCFX
>,_6 1440 bp.
FFFFFFSM*YHRSIQSR*SRRTWDRDGWRSLDMVFDSIWRMRSRVTP*TLPISSSVFG*P
SVRPNRIDTTPASRSDSVSRTECSCSCSSVKLTASAGTMASESSMRSPNSLSPSSPSGVC
REMGSRPYFWTSTTFSGVMSSSRASSSGVGSRPRSCSICRWTRASLLITSTMWTGMRMVR
AWSAMARVIACRIHHVA*VENL*PLV*SNFSTALIRPRLPSWIRSRKSMPRPV*RLASET
TSRRLASSRWFLARRPSSAIHSSSALTSTGSPSVSPPPSCSSANRPASMRLASSTSCSAL
SRGTLPICLR*SFTGSAVAPAAATWATGASSSSSERMRTSSSVFCTAATSAALGSSSESS
SSESPSESASSSATISSTSMSSRSSSSTSPSSSMSSSSSVSPRGASGAFGLVSAGPAFFC
SAFLAAAGAAAFFAAGAAFLAGAAFLAAGSASAVPTTAVMC*SIDVASR**SIDR*SMFL

so che l'asterisco indica un segnale di stop, ma poi non ho capito quando il prof dice "se la nostra sequenza nucleotica codifica una proteina, č probabile che questa corrisponda alla piu lunga sequenza amminoacidica contenuta tra due segnali di stop"

help please
  Discussione  

Quanto č utile/interessante questa discussione:

 Nuova Discussione  Nuovo Sondaggio Nuovo Sondaggio
 Rispondi Aggiungi ai Preferiti Aggiungi ai Preferiti
Cerca nelle discussioni
Vai a:
MolecularLab.it © 2003-18 MolecularLab.it Torna all'inizio della Pagina